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The ability of an organism to measure time is the product of a cellular biological clock. Many phenomena controlled by the biological clock cycle on a daily basis and are called circadian rhythms. My goal is to understand the genetic and biochemical mechanisms by which an organism measures time and uses that temporal information to regulate gene expressionand cellular physiology.
Wang, S., D. Feng, P. Lou, Y. Zheng, Y. Lu, K. Shi, R. Yang, W. Ma, N. Li, M. Liu, Y. Wang, Y. Hong, C.R. McClung & J. Zhao. 2025. EARLY FLOWERING 3 alleles affect the temperature responsiveness of the circadian clock in Chinese cabbage. Plant Physiol. 197, kiae505. doi 10.1093/plphys/kiae505
Paeng, S.K., S.D. Wi, H.B. Chae, S.B. Bae, K.A.T. Phan, M.G. Kim, D.-J. Yun, W.-Y. Kim, C.R. McClung & S.Y. Lee. 2025. NTRCmediates the coupling of chloroplast redox rhythm with nuclear circadian clock in plant cells. Mol. Plant, 18, 468–484, doi 10.1016/j.molp.2025.01.014.
Anton-Sales, C., E. Van den Bergh, A. Thérèse-Navarro , Alejandro, E. Severing, D. Moñino-López, J. Di Palma, M. Proveniers, C.R. McClung, M. Jeuken & G. Bonnema. 2025. Breeding for delayed bolting decelerated the circadian clock in cultivated lettuce. New Phytol. doi: 10.1111/nph.70489.
Lou, P., Greenham, K., McClung, C.R. (2022) Rhythmic Leaf and Cotyledon Movement Analysis. Methods Mol Biol. 2022;2494:125-134. doi: 10.1007/978-1-0716-2297-1_9. PMID: 35467204
Deng. L., Gao, B., Zhao, L., Zhang, Y., Zhang, Q., Guo, M., Yang, Y., Wang, S., Xie, L., Lou, H., Ma, M., Zhang, W., Cao, Z., Zhang, Q., McClung, C.R, Li, G., Li, X. (2022) Diurnal RNAPII-tethered chromatin interactions are associated with rhythmic gene expression in rice. Genome Biol. Jan 6;23(1):7. doi: 10.1186/s13059-021-02594-7. PMID: 34991658
McClung, C.R. (2021) Circadian Clock Components Offer Targets for Crop Domestication and Improvement. Genes (Basel). 2021 Mar 6;12(3):374. doi: 10.3390/genes12030374. PMID: 33800720
Lou, P., S. Woody, K. Greenham, R.VanBuren, M. Colle, P.P. Edger, R. Sartor, Y. Zheng, N. Levendoski, J. Lim, C.So, B. Stoveken, T. Woody, J. Zhao, S. Shen, R.M. Amasino & C.R. McClung. 2020. Genetic and genomic resources to study natural variation in Brassica rapa. Plant Direct. Dec 22;4(12):e00285. doi: 10.1002/pld3.285.
Deng. L., Gao, B., Zhao, L., Zhang, Y., Zhang, Q., Guo, M., Yang, Y., Wang, S., Xie, L., Lou, H., Ma, M., Zhang, W., Cao, Z., Zhang, Q., McClung, C.R, Li, G., Li, X. (2022) Diurnal RNAPII-tethered chromatin interactions are associated with rhythmic gene expression in rice. Genome Biol. Jan 6;23(1):7. doi: 10.1186/s13059-021-02594-7. PMID: 34991658
McClung, C.R. (2021) Circadian Clock Components Offer Targets for Crop Domestication and Improvement. Genes (Basel). Mar 6;12(3):374. doi: 10.3390/genes12030374. PMID: 33800720
Greenham, K., R.C. Sartor, S. Zorich, P. Lou, T.C. Mockler, & C.R. McClung. 2020. Expansion of the circadian transcriptome in Brassica rapa and genome wide diversification of paralog expression patterns. Elife. Sep 30;9:e58993. doi: 10.7554/eLife.58993
Leinonen, P.H., M.J. Salmela, K. Greenham, C.R. McClung, & J.H. Willis. 2020. Populations are differentiated in biological rhythms without explicit elevational clines in the plant Mimulus laciniatus. J. Biol. Rhythms 35: 452-464. doi: 10.1177/0748730420936408.