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I am fascinated by the elaborate and beautiful spatial organization of the cell. Subcellular compartments, such as organelles, create unique biochemical environments and molecular compositions within the cell, and I believe such intracellular organization is one of the major aspects that makes a cell a cell, not just a "mere bag of enzymes". I combine quantitative imaging, biochemistry, genetics, and mathematical modeling to seek to discover the fundamental mechanisms that cooperate to give rise to the highly organized cellular environment. My research focuses on the nuclear compartment and uses early Drosophila embryos as a model to understand the mechanisms that govern the dynamic remodeling of intracellular organization over the course of development.
Shindo Y (co-corresponding author), Brown MG and Amodeo AA. Versatile roles for histones in early development. Current Opinion in Cell Biology. 75 102069 (2022)
Shindo Y (co-corresponding author) and Amodeo AA. Modeling the roles for nuclear import dynamics in the early embryonic cell cycle. Biophysical Journal. 120 4277–4286 (2021)
Shindo Y and Amodeo AA. Excess histone H3 is a competitive Chk1 inhibitor that controls cell-cycle remodeling in the early Drosophila embryo. Current Biology 31 2633–2642 (2021)
Shindo Y and Amodeo AA. Dynamics of free and chromatin-bound histone H3 during early embryogenesis. Current Biology 29 359–366 (2019)
Shindo Y (co-corresponding author), Iwamoto K Mouri K Hibino K Tomita M Kosako H Sako Y and Takahashi K. Conversion of graded phosphorylation into switch-like nuclear translocation via autoregulatory mechanisms in ERK signalling. Nature Communications 7 10485 (2016)